ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vvqD1 - ECOD Domain | ECOD

ECOD/Domains/e2vvqD1

e2vvqD1

UID: 000109982

PDB

Range: D:3-158
PDB: 2VVQ chain D(all domains)
UniProt: P9WKD7 (all domains)
Gene: rpiB

Molecule: RIBOSE-5-PHOSPHATE ISOMERASE B

3D Structure

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Related Domains

Browse other domains in LacAB_rpiB →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRibose/Galactose isomerase RpiB/AlsB(7560)

HH-groupRibose/Galactose isomerase RpiB/AlsB(7560.1)

TT-groupRibose/Galactose isomerase RpiB/AlsB(7560.1.1)

FFamilyLacAB_rpiB(7560.1.1.1)

Ligands

in contact, ≤ 4 Å

5-O-phosphono-D-ribonic acidR10

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02502LacAB_rpiB

Ribose/Galactose Isomerase

ClanCL0939RpiB-like

External Links

ECOD PDB View: 2VVQ RCSB PDB: 2VVQ PDBe: 2VVQ UniProt: P9WKD7

Downloads

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