ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4itcA1 - ECOD Domain | ECOD

ECOD/Domains/e4itcA1

e4itcA1

UID: 001101276

PDB

Range: A:982-1154
PDB: 4ITC chain A(all domains)
UniProt: Q51817 (all domains)
Gene: kgp

Molecule: Lys-gingipain W83

3D Structure

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Related Domains

Browse other domains in Cleaved_Adhesin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupConcanavalin A-like(10.1)

TT-groupConcanavalin A-like lectins/glucanases(10.1.1)

FFamilyCleaved_Adhesin(10.1.1.24)

Ligands

in contact, ≤ 4 Å

GuanidineGAI
drugDrugBank DB00536
Calcium ionCA
metal

+ 1 additive (Glycerin)

Pfam Families

PF07675Cleaved_Adhesin

Cleaved Adhesin Domain

ClanCL0004Concanavalin

External Links

ECOD PDB View: 4ITC RCSB PDB: 4ITC PDBe: 4ITC UniProt: Q51817

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Glycerin

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.