ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4jemA1 - ECOD Domain | ECOD

ECOD/Domains/e4jemA1

e4jemA1

UID: 001101635

PDB

Range: A:12-168
PDB: 4JEM chain A(all domains)
UniProt: B4Y381 (all domains)
Gene: MilB

Molecule: CMP/hydroxymethyl CMP hydrolase

3D Structure

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Related Domains

Browse other domains in Nuc_deoxyrib_tr →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupN-deoxyribosyltransferase(2007.15)

TT-groupN-deoxyribosyltransferase(2007.15.1)

FFamilyNuc_deoxyrib_tr(2007.15.1.2)

Ligands

in contact, ≤ 4 Å

Cytidine-5'-MonophosphateC5P
drugDrugBank DB03403

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05014Nuc_deoxyrib_tr

Nucleoside 2-deoxyribosyltransferase

ClanCL0498Nribosyltransf

External Links

ECOD PDB View: 4JEM RCSB PDB: 4JEM PDBe: 4JEM UniProt: B4Y381

Downloads

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