ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1gqyB3 - ECOD Domain | ECOD

ECOD/Domains/e1gqyB3

e1gqyB3

UID: 000110171

PDB

Range: B:322-473
PDB: 1GQY chain B(all domains)
UniProt: P45066 (all domains)
Gene: murC

Molecule: UDP-N-ACETYLMURAMATE-L-ALANINE LIGASE

3D Structure

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Related Domains

Browse other domains in Mur_ligase_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupMurD-like peptide ligases, peptide-binding domain(7570)

HH-groupMurD-like peptide ligases, peptide-binding domain(7570.1)

TT-groupMurD-like peptide ligases, peptide-binding domain(7570.1.1)

FFamilyMur_ligase_C(7570.1.1.1)

Ligands

in contact, ≤ 4 Å

Adenosine-5'-[Beta, Gamma-Methylene]TriphosphateACP
drugDrugBank DB03909
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer.

Pfam Families

PF02875Mur_ligase_C

Mur ligase, glutamate ligase domain

ClanCL0794Mur_ligase_C_sf

External Links

ECOD PDB View: 1GQY RCSB PDB: 1GQY PDBe: 1GQY UniProt: P45066

Downloads

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Drug annotations from DrugDomain.