ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4jphB1 - ECOD Domain | ECOD

ECOD/Domains/e4jphB1

e4jphB1

UID: 001101761

PDB

Range: B:50-160
PDB: 4JPH chain B(all domains)
UniProt: O88273 (all domains)
Gene: Grem2

Molecule: Gremlin-2

3D Structure

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Related Domains

Browse other domains in DAN →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupCystine-knot cytokines(385)

HH-groupCystine-knot cytokines(385.1)

TT-groupCystine-knot cytokines(385.1.1)

FFamilyDAN(385.1.1.8)

Ligands

in contact, ≤ 4 Å

GlutathioneGSH
drugDrugBank DB00143

+ 2 additives (Citric acid, Glycerin)

Citric acidCIT
DrugBank DB04272

Pfam Families

DAN domain

ClanCL0079Cystine-knot

External Links

ECOD PDB View: 4JPH RCSB PDB: 4JPH PDBe: 4JPH UniProt: O88273

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Glycerin

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.