ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e4kb8C1 - ECOD Domain | ECOD

ECOD/Domains/e4kb8C1

e4kb8C1

UID: 001101929

PDB

Range: C:7-293
PDB: 4KB8 chain C(all domains)
UniProt: P48730 (all domains)
Gene: CSNK1D

Molecule: Casein kinase I isoform delta

3D Structure

Loading viewer...

Related Domains

Browse other domains in Pkinase, Pkinase_fungal →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPkinase, Pkinase_fungal(206.1.1.72)

Ligands

in contact, ≤ 4 Å

1-{4-[3-(4-fluorophenyl)-1-methyl-1H-pyrazol-4-yl]pyridin-2-yl}-N-methylmethanamine1QN

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00069Pkinase

Protein kinase domain

ClanCL0016PKinase

PF17667Pkinase_fungal

Fungal protein kinase

ClanCL0016PKinase

External Links

ECOD PDB View: 4KB8 RCSB PDB: 4KB8 PDBe: 4KB8 UniProt: P48730

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure