ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3kp0C3 - ECOD Domain | ECOD

ECOD/Domains/e3kp0C3

e3kp0C3

UID: 001102174

PDB

Range: C:5-506
PDB: 3KP0 chain C(all domains)
UniProt: E3PY95 (all domains)
Gene: oraE

Molecule: D-ornithine aminomutase E component

3D Structure

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Related Domains

Browse other domains in Lys-AminoMut_A →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyLys-AminoMut_A(2002.1.1.158)

Ligands

in contact, ≤ 4 Å

(2S)-2-amino-4-{[(1Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}butanoic acidZ98

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09043Lys-AminoMut_A

D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3KP0 RCSB PDB: 3KP0 PDBe: 3KP0 UniProt: E3PY95

Downloads

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