ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1sa3A1 - ECOD Domain | ECOD

ECOD/Domains/e1sa3A1

e1sa3A1

UID: 000011031

RepresentativePDB

Range: A:1-262
PDB: 1SA3 chain A(all domains)
UniProt: P11405 (all domains)
Gene: mspIR

Molecule: Type II restriction enzyme MspI

3D Structure

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Related Domains

Browse other domains in Endonuc-MspI →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyEndonuc-MspI(2008.1.1.40)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

Shown in the structure viewer.

Pfam Families

PF09208Endonuc-MspI

Restriction endonuclease MspI

ClanCL0236PDDEXK

External Links

ECOD PDB View: 1SA3 RCSB PDB: 1SA3 PDBe: 1SA3 UniProt: P11405

Downloads

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