ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3wevB2 - ECOD Domain | ECOD

ECOD/Domains/e3wevB2

e3wevB2

UID: 001105608

PDB

Range: B:249-685
PDB: 3WEV chain B(all domains)
UniProt: F2JXJ3 (all domains)
Gene: lodA

Molecule: L-lysine 6-oxidase

3D Structure

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Related Domains

Browse other domains in LodA_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupL-Lys epsilon-oxidase C-terminal domain(3752)

HH-groupL-Lys epsilon-oxidase C-terminal domain(3752.1)

TT-groupL-Lys epsilon-oxidase C-terminal domain(3752.1.1)

FFamilyLodA_C(3752.1.1.1)

Ligands

in contact, ≤ 4 Å

LysineLYS
drugDrugBank DB00123

+ 3 additives (1,4-Dioxane, 1,2-ETHANEDIOL, Sulfate ion)

1,4-DioxaneDIO
DrugBank DB03316

Pfam Families

L-lysine epsilon oxidase C-terminal domain

External Links

ECOD PDB View: 3WEV RCSB PDB: 3WEV PDBe: 3WEV UniProt: F2JXJ3

Downloads

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1,2-ETHANEDIOL

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.