ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4bupB1 - ECOD Domain | ECOD

ECOD/Domains/e4bupB1

e4bupB1

UID: 001106660

PDB

Range: B:61-93,B:122-325
PDB: 4BUP chain B(all domains)
UniProt: Q3U8K7 (all domains)
Gene: Kmt5b

Molecule: HISTONE-LYSINE N-METHYLTRANSFERASE SUV420H1

3D Structure

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Related Domains

Browse other domains in SET →

Classification

AArchitecturebeta barrels(a.1)

XX-groupbeta-clip(70)

HH-groupSET domain-like(70.3)

TT-groupSET domain-like(70.3.1)

FFamilySET(70.3.1.1)

Ligands

in contact, ≤ 4 Å

AdemetionineSAM
drugDrugBank DB00118
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

SET domain

ClanCL0489SAF

External Links

ECOD PDB View: 4BUP RCSB PDB: 4BUP PDBe: 4BUP UniProt: Q3U8K7

Downloads

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