ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ejbB1 - ECOD Domain | ECOD

ECOD/Domains/e1ejbB1

e1ejbB1

UID: 000110668

PDB

Range: B:1-168
PDB: 1EJB chain B(all domains)
UniProt: P50861 (all domains)
Gene: RIB4

Molecule: LUMAZINE SYNTHASE

3D Structure

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Related Domains

Browse other domains in DMRL_synthase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupLumazine synthase(2007.1.13)

FFamilyDMRL_synthase(2007.1.13.1)

Ligands

in contact, ≤ 4 Å

5-(6-D-ribitylamino-2,4-dihydroxypyrimidin-5-yl)-1-pentyl-phosphonic acidINJ
drugDrugBank DB04266

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00885DMRL_synthase

6,7-dimethyl-8-ribityllumazine synthase

External Links

ECOD PDB View: 1EJB RCSB PDB: 1EJB PDBe: 1EJB UniProt: P50861

Downloads

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