ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4kp7A2 - ECOD Domain | ECOD

ECOD/Domains/e4kp7A2

e4kp7A2

UID: 001106726

PDB

Range: A:206-358
PDB: 4KP7 chain A(all domains)
UniProt: O96693 (all domains)
Gene: DXR

Molecule: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, apicoplast

3D Structure

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Related Domains

Browse other domains in DXP_redisom_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFwdE/GAPDH domain-like(298)

HH-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1)

TT-groupGlyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain(298.1.1)

FFamilyDXP_redisom_C(298.1.1.10)

Ligands

in contact, ≤ 4 Å

Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461
[(S)-({2-[hydroxy(methyl)amino]-2-oxoethyl}sulfanyl)(phenyl)methyl]phosphonic acid1UQ
MANGANESE (III) ION

Pfam Families

PF08436DXP_redisom_C

1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain

ClanCL0139GADPH_aa-bio_dh

External Links

ECOD PDB View: 4KP7 RCSB PDB: 4KP7 PDBe: 4KP7 UniProt: O96693

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.