ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4kp7A3 - ECOD Domain | ECOD

ECOD/Domains/e4kp7A3

e4kp7A3

UID: 001106727

PDB

Range: A:77-205,A:359-384
PDB: 4KP7 chain A(all domains)
UniProt: O96693 (all domains)
Gene: DXR

Molecule: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, apicoplast

3D Structure

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Related Domains

Browse other domains in DXP_reductoisom →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyDXP_reductoisom(2003.1.1.33)

Ligands

in contact, ≤ 4 Å

Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461
[(S)-({2-[hydroxy(methyl)amino]-2-oxoethyl}sulfanyl)(phenyl)methyl]phosphonic acid1UQ
MANGANESE (III) ION

Pfam Families

PF02670DXP_reductoisom

1-deoxy-D-xylulose 5-phosphate reductoisomerase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4KP7 RCSB PDB: 4KP7 PDBe: 4KP7 UniProt: O96693

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.