ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4jhoA1 - ECOD Domain | ECOD

ECOD/Domains/e4jhoA1

e4jhoA1

UID: 001107148

PDB

Range: A:1-478
PDB: 4JHO chain A(all domains)
UniProt: A2YPH1 (all domains)
Gene: OsI_27163

Molecule: Beta-mannosidase/beta-glucosidase

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_1 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_1(2002.1.1.12)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (HEPES, Glycerin)

HEPESEPE
DrugBank DB16872
GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00232Glyco_hydro_1

Glycosyl hydrolase family 1

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4JHO RCSB PDB: 4JHO PDBe: 4JHO UniProt: A2YPH1

Downloads

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