ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4mk7A2 - ECOD Domain | ECOD

ECOD/Domains/e4mk7A2

e4mk7A2

UID: 001107304

PDB

Range: A:1-347
PDB: 4MK7 chain A(all domains)
UniProt: P26663 (all domains)

Molecule: RNA-DIRECTED RNA POLYMERASE

3D Structure

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Related Domains

Browse other domains in RdRP_3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyRdRP_3(304.48.1.15)

Ligands

in contact, ≤ 4 Å

3-(3-tert-butyl-4-methoxyphenyl)pyridin-2(1H)-one28O
Magnesium ionMG
metal

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS

Pfam Families

Viral RNA dependent RNA polymerase

ClanCL0027RdRP

External Links

ECOD PDB View: 4MK7 RCSB PDB: 4MK7 PDBe: 4MK7 UniProt: P26663

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB01093

Shown in the structure viewer. Drug annotations from DrugDomain.