ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4jwfA1 - ECOD Domain | ECOD

ECOD/Domains/e4jwfA1

e4jwfA1

UID: 001107634

PDB

Range: A:84-270
PDB: 4JWF chain A(all domains)
UniProt: O14214 (all domains)
Gene: trm10

Molecule: tRNA (guanine(9)-N1)-methyltransferase

3D Structure

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Related Domains

Browse other domains in TRM10_TRM10A →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilyTRM10_TRM10A(2488.1.1.19)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752

+ 1 additive (Acetic acid)

Acetic acidACY
DrugBank DB03166

Shown in the structure viewer.

Pfam Families

PF27710TRM10_TRM10A

tRNA (guanine(9)-N(1))-methyltransferase TRM10/TRM10A

ClanCL0098SPOUT

External Links

ECOD PDB View: 4JWF RCSB PDB: 4JWF PDBe: 4JWF UniProt: O14214

Downloads

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Drug annotations from DrugDomain.