ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4mmfA1 - ECOD Domain | ECOD

ECOD/Domains/e4mmfA1

e4mmfA1

UID: 001107897

PDB

Range: A:5-511
PDB: 4MMF chain A(all domains)
UniProt: O67854 (all domains)
Gene: snf

Molecule: Transporter

3D Structure

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Related Domains

Browse other domains in SNF →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupSodium:neurotransmitter symporter family (SNF)-like(5051)

HH-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1)

TT-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1.1)

FFamilySNF(5051.1.1.1)

Ligands

in contact, ≤ 4 Å

(5R)-5-(4-chlorophenyl)-2,5-dihydro-3H-imidazo[2,1-a]isoindol-5-ol29Q
Sodium ionNA
metal

+ 1 additive (octyl beta-D-glucopyranoside)

octyl beta-D-glucopyranosideBOG

Pfam Families

Sodium:neurotransmitter symporter family

ClanCL0062APC

External Links

ECOD PDB View: 4MMF RCSB PDB: 4MMF PDBe: 4MMF UniProt: O67854

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.