ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3a0bB1 - ECOD Domain | ECOD

ECOD/Domains/e3a0bB1

e3a0bB1

UID: 001108156

PDB

Range: B:5-328,B:445-489
PDB: 3A0B chain B(all domains)
UniProt: D0VWR1 (all domains)
Gene: psbB

Molecule: Photosystem II core light harvesting protein

3D Structure

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Related Domains

Browse other domains in PSII →

Classification

AArchitecturealpha bundles(a.7)

XX-groupPhotosystem II antenna protein-like(5075)

HH-groupPhotosystem II antenna protein-like(5075.1)

TT-groupPhotosystem II antenna protein-like(5075.1.1)

FFamilyPSII(5075.1.1.2)

Ligands

in contact, ≤ 4 Å

Beta caroteneBCR
drugDrugBank DB06755
Chlorophyll ACLA
drugDrugBank DB02133
Digalactosyl Diacyl Glycerol (Dgdg)

Pfam Families

Photosystem II protein

External Links

ECOD PDB View: 3A0B RCSB PDB: 3A0B PDBe: 3A0B UniProt: D0VWR1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

drugDrugBank DB03426

MonogalactosyldiacylglycerolMGE

drugDrugBank DB04735

Shown in the structure viewer. Drug annotations from DrugDomain.