ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3b5mD1 - ECOD Domain | ECOD

ECOD/Domains/e3b5mD1

e3b5mD1

UID: 001108194

PDB

Range: D:2-127
PDB: 3B5M chain D(all domains)
UniProt: Q7UTD8 (all domains)
Gene: RB3938

Molecule: Uncharacterized protein

3D Structure

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Related Domains

Browse other domains in DUF447_N →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel(1.1.5)

FFamilyDUF447_N(1.1.5.17)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04289DUF447_N

Protein of unknown function (DUF447) N-terminal domain

ClanCL0336FMN-binding

External Links

ECOD PDB View: 3B5M RCSB PDB: 3B5M PDBe: 3B5M UniProt: Q7UTD8

Downloads

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