ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4c7rC1 - ECOD Domain | ECOD

ECOD/Domains/e4c7rC1

e4c7rC1

UID: 001108699

PDB

Range: C:56-561
PDB: 4C7R chain C(all domains)
UniProt: P54582 (all domains)
Gene: betP

Molecule: GLYCINE BETAINE TRANSPORTER BETP

3D Structure

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Related Domains

Browse other domains in BCCT →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupSodium:neurotransmitter symporter family (SNF)-like(5051)

HH-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1)

TT-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1.1)

FFamilyBCCT(5051.1.1.8)

Ligands

in contact, ≤ 4 Å

Cyclohexyl-pentyl-maltosideCM5
drugDrugBank DB04664
Chloride ionCL
(1S)-2-{[{[(2R)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL STEARATEPGT

Pfam Families

BCCT, betaine/carnitine/choline family transporter

ClanCL0062APC

External Links

ECOD PDB View: 4C7R RCSB PDB: 4C7R PDBe: 4C7R UniProt: P54582

Downloads

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+ 1 additive (Citrate anion)

Citrate anionFLC

Shown in the structure viewer. Drug annotations from DrugDomain.