ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1umbB2 - ECOD Domain | ECOD

ECOD/Domains/e1umbB2

e1umbB2

UID: 000110879

PDB

Range: B:2-187
PDB: 1UMB chain B(all domains)
UniProt: Q5SLR3 (all domains)
Gene: TTHA0230

Molecule: 2-oxo acid dehydrogenase beta subunit

3D Structure

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Related Domains

Browse other domains in Transket_pyr →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThiamin diphosphate-binding fold (THDP-binding)(7574)

HH-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1)

TT-groupThiamin diphosphate-binding fold (THDP-binding)(7574.1.1)

FFamilyTransket_pyr(7574.1.1.8)

Ligands

in contact, ≤ 4 Å

Thiamine diphosphateTPP

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02779Transket_pyr

Transketolase, pyrimidine binding domain

ClanCL0254THDP-binding

External Links

ECOD PDB View: 1UMB RCSB PDB: 1UMB PDBe: 1UMB UniProt: Q5SLR3

Downloads

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