ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3glrA1 - ECOD Domain | ECOD

ECOD/Domains/e3glrA1

e3glrA1

UID: 001109001

PDB

Range: A:121-245,A:289-394
PDB: 3GLR chain A(all domains)
UniProt: Q9NTG7 (all domains)
Gene: SIRT3

Molecule: NAD-dependent deacetylase sirtuin-3, mitochondrial

3D Structure

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Related Domains

Browse other domains in SIR2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupDHS-like NAD/FAD-binding domain(2003.1.4)

FFamilySIR2(2003.1.4.5)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Glycerin, Sulfate ion, Bicarbonate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546within 5 Å only
Bicarbonate ion

Pfam Families

Sir2 family

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3GLR RCSB PDB: 3GLR PDBe: 3GLR UniProt: Q9NTG7

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.