ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4hm0A2 - ECOD Domain | ECOD

ECOD/Domains/e4hm0A2

e4hm0A2

UID: 001109167

PDB

Range: A:155-448
PDB: 4HM0 chain A(all domains)
UniProt: P0A111 (all domains)
Gene: doxB

Molecule: Naphthalene 1,2-dioxygenase subunit alpha

3D Structure

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Related Domains

Browse other domains in Ring_hydroxyl_A →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTBP-like(331)

HH-groupBet v1-like(331.3)

TT-groupBet v1-like(331.3.1)

FFamilyRing_hydroxyl_A(331.3.1.2)

Ligands

in contact, ≤ 4 Å

Indoleacetic acidIAC
drugDrugBank DB07950
FE (III) IONFE
metal

+ 2 additives (Sulfate ion, 1,2-ETHANEDIOL)

Pfam Families

PF00848Ring_hydroxyl_A

Ring hydroxylating alpha subunit (catalytic domain)

ClanCL0209Bet_v_1_like

External Links

ECOD PDB View: 4HM0 RCSB PDB: 4HM0 PDBe: 4HM0 UniProt: P0A111

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4

DrugBank DB14546

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.