ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4i6rB1 - ECOD Domain | ECOD

ECOD/Domains/e4i6rB1

e4i6rB1

UID: 001109387

PDB

Range: B:3-79
PDB: 4I6R chain B(all domains)
UniProt: Q8GGH0 (all domains)
Gene: esp1396IC

Molecule: Regulatory protein

3D Structure

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Related Domains

Browse other domains in HTH_3 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-grouptetra-helical, lambda repressor-like(101.1.4)

FFamilyHTH_3(101.1.4.3)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Sulfate ion)

GlycerinGOL
DrugBank DB09462
Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Helix-turn-helix

ClanCL0123HTH

External Links

ECOD PDB View: 4I6R RCSB PDB: 4I6R PDBe: 4I6R UniProt: Q8GGH0

Downloads

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