ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4imfA1 - ECOD Domain | ECOD

ECOD/Domains/e4imfA1

e4imfA1

UID: 001109568

PDB

Range: A:2-293
PDB: 4IMF chain A(all domains)
UniProt: Q9CKB0 (all domains)
Gene: nanA

Molecule: N-acetylneuraminate lyase

3D Structure

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Related Domains

Browse other domains in DHDPS →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDHDPS(2002.1.1.29)

Ligands

in contact, ≤ 4 Å

Diethylene glycol ethyl methyl etherME2
drugDrugBank DB03508
Aceneuramic acidSI3
drugDrugBank DB11797

Pfam Families

Dihydrodipicolinate synthetase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4IMF RCSB PDB: 4IMF PDBe: 4IMF UniProt: Q9CKB0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Chloride ionCL

+ 1 additive (Isopropyl alcohol)

Isopropyl alcoholIPA
DrugBank DB02325

Shown in the structure viewer. Drug annotations from DrugDomain.