ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1m72B1 - ECOD Domain | ECOD

ECOD/Domains/e1m72B1

e1m72B1

UID: 000111193

PDB

Range: B:41-295
PDB: 1M72 chain B(all domains)
UniProt: P89116 (all domains)

Molecule: Caspase-1

3D Structure

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Related Domains

Browse other domains in Peptidase_C14 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupCaspase-like(7575)

HH-groupCaspase-like(7575.1)

TT-groupCaspase-like(7575.1.1)

FFamilyPeptidase_C14(7575.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00656Peptidase_C14

Caspase domain

ClanCL0093Peptidase_CD

External Links

ECOD PDB View: 1M72 RCSB PDB: 1M72 PDBe: 1M72 UniProt: P89116

Downloads

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