ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4igoA1 - ECOD Domain | ECOD

ECOD/Domains/e4igoA1

e4igoA1

UID: 001115372

PDB

Range: A:139-223,A:262-325,A:350-498
PDB: 4IGO chain A(all domains)
UniProt: Q53WJ1 (all domains)
Gene: JMJ703

Molecule: Os05g0196500 protein

3D Structure

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Related Domains

Browse other domains in JmjC,JmjN →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyJmjC,JmjN(10.12.1.10)

Ligands

in contact, ≤ 4 Å

Oxogluric acidAKG
drugDrugBank DB08845
FE (III) IONFE
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

JmjC domain, hydroxylase

ClanCL0029Cupin

jmjN domain

ClanCL0029Cupin

External Links

ECOD PDB View: 4IGO RCSB PDB: 4IGO PDBe: 4IGO UniProt: Q53WJ1

Downloads

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