ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4igpA1 - ECOD Domain | ECOD

ECOD/Domains/e4igpA1

e4igpA1

UID: 001115373

PDB

Range: A:139-223,A:262-325,A:350-498
PDB: 4IGP chain A(all domains)
UniProt: Q53WJ1 (all domains)
Gene: JMJ703

Molecule: Os05g0196500 protein

3D Structure

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Related Domains

Browse other domains in JmjC,JmjN →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyJmjC,JmjN(10.12.1.10)

Ligands

in contact, ≤ 4 Å

FE (III) IONFE
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

JmjC domain, hydroxylase

ClanCL0029Cupin

jmjN domain

ClanCL0029Cupin

External Links

ECOD PDB View: 4IGP RCSB PDB: 4IGP PDBe: 4IGP UniProt: Q53WJ1

Downloads

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