ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3m5pA1 - ECOD Domain | ECOD

ECOD/Domains/e3m5pA1

e3m5pA1

UID: 001115876

PDB

Range: A:-1-276
PDB: 3M5P chain A(all domains)
UniProt: Q5NFC4 (all domains)
Gene: pgi

Molecule: Glucose-6-phosphate isomerase

3D Structure

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Related Domains

Browse other domains in PGI →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupRibosomal protein S2/SIS domain(2007.6)

TT-groupRibosomal protein S2/SIS domain(2007.6.1)

FFamilyPGI(2007.6.1.3)

Ligands

in contact, ≤ 4 Å

6-O-phosphono-beta-D-fructofuranoseF6P
Sodium ionNA
metal

+ 2 additives (Phosphate ion, Glycerol)

Phosphate ionPO4

Pfam Families

Phosphoglucose isomerase

ClanCL0067SIS

External Links

ECOD PDB View: 3M5P RCSB PDB: 3M5P PDBe: 3M5P UniProt: Q5NFC4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14523

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.