ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1q16B2 - ECOD Domain | ECOD

ECOD/Domains/e1q16B2

e1q16B2

UID: 001116303

PDB

Range: B:184-243
PDB: 1Q16 chain B(all domains)
UniProt: P11349 (all domains)
Gene: narH

Molecule: Respiratory nitrate reductase 1 beta chain

3D Structure

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Related Domains

Browse other domains in Fer4_11 →

Classification

AArchitecturea+b two layers(a.11)

XX-group4Fe-4S ferredoxin(205)

HH-group4Fe-4S ferredoxin(205.1)

TT-group4Fe-4S ferredoxin(205.1.1)

FFamilyFer4_11(205.1.1.17)

Ligands

in contact, ≤ 4 Å

(1S)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PENTANOYLOXY)METHYL]ETHYL OCTANOATEAGA
drugDrugBank DB07349
FE3-S4 CLUSTERF3S
Protoporphyrin ix containing fe

Pfam Families

PF13247Fer4_11

4Fe-4S dicluster domain

ClanCL03444Fe-4S

External Links

ECOD PDB View: 1Q16 RCSB PDB: 1Q16 PDBe: 1Q16 UniProt: P11349

Downloads

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Iron/sulfur clusterSF4

Shown in the structure viewer. Drug annotations from DrugDomain.