ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3s8bA2 - ECOD Domain | ECOD

ECOD/Domains/e3s8bA2

e3s8bA2

UID: 001116601

PDB

Range: A:215-746
PDB: 3S8B chain A(all domains)
UniProt: P21524 (all domains)
Gene: RNR1

Molecule: Ribonucleoside-diphosphate reductase large chain 1

3D Structure

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Related Domains

Browse other domains in Ribonuc_red_lgC →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTen stranded beta/alpha barrel(2500)

HH-groupTen stranded beta/alpha barrel(2500.1)

TT-groupTen stranded beta/alpha barrel(2500.1.1)

FFamilyRibonuc_red_lgC(2500.1.1.2)

Ligands

in contact, ≤ 4 Å

Cytidine-5'-DiphosphateCDP
drugDrugBank DB04555
Phosphoaminophosphonic acid-adenylate esterANP
Magnesium ionMG

Pfam Families

PF02867Ribonuc_red_lgC

Ribonucleotide reductase, barrel domain

ClanCL0339PFL-like

External Links

ECOD PDB View: 3S8B RCSB PDB: 3S8B PDBe: 3S8B UniProt: P21524

Downloads

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metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.