ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1sbrA2 - ECOD Domain | ECOD

ECOD/Domains/e1sbrA2

e1sbrA2

UID: 001116613

PDB

Range: A:9-96
PDB: 1SBR chain A(all domains)
UniProt: O34911 (all domains)
Gene: ykoF

Molecule: ykoF

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ykof →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupMTH1187/YkoF-like(304.26)

TT-groupMTH1187/YkoF-like(304.26.1)

FFamilyYkof(304.26.1.2)

Ligands

in contact, ≤ 4 Å

ThiamineVIB
drugDrugBank DB00152
Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

YKOF-related Family

ClanCL0360MTH1187-YkoF

External Links

ECOD PDB View: 1SBR RCSB PDB: 1SBR PDBe: 1SBR UniProt: O34911

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure