ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2yptB1 - ECOD Domain | ECOD

ECOD/Domains/e2yptB1

e2yptB1

UID: 001117341

PDB

Range: B:10-285,B:322-472
PDB: 2YPT chain B(all domains)
UniProt: O75844 (all domains)
Gene: ZMPSTE24

Molecule: CAAX PRENYL PROTEASE 1 HOMOLOG

3D Structure

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Related Domains

Browse other domains in Peptidase_M48,Peptidase_M48_N →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M48,Peptidase_M48_N(2498.1.1.11)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01435Peptidase_M48

Peptidase family M48

ClanCL0126Peptidase_MA

PF16491Peptidase_M48_N

CAAX prenyl protease N-terminal, five membrane helices

External Links

ECOD PDB View: 2YPT RCSB PDB: 2YPT PDBe: 2YPT UniProt: O75844

Downloads

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