ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4n0lA1 - ECOD Domain | ECOD

ECOD/Domains/e4n0lA1

e4n0lA1

UID: 001117803

RepresentativePDB

Range: A:3-351
PDB: 4N0L chain A(all domains)
UniProt: Q8TVS2 (all domains)
Gene: MK1316

Molecule: Predicted component of a thermophile-specific DNA repair system, contains a RAMP domain

3D Structure

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Related Domains

Browse other domains in RAMPs →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupCas7-related(304.139)

TT-groupCRISPR-associated protein Cas7/Csa2-related(304.139.1)

FFamilyRAMPs(304.139.1.2)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

RAMP superfamily

ClanCL0362RAMPS-Cas5-like

External Links

ECOD PDB View: 4N0L RCSB PDB: 4N0L PDBe: 4N0L UniProt: Q8TVS2

Downloads

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