ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4jbdA1 - ECOD Domain | ECOD

ECOD/Domains/e4jbdA1

e4jbdA1

UID: 001118501

PDB

Range: A:1-147
PDB: 4JBD chain A(all domains)
UniProt: A5VZY6 (all domains)
Gene: Pput_1285

Molecule: Proline racemase

3D Structure

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Related Domains

Browse other domains in Pro_racemase →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupDiaminopimelate epimerase-like(286)

HH-groupDiaminopimelate epimerase-like(286.1)

TT-groupDiaminopimelate epimerase-like(286.1.1)

FFamilyPro_racemase(286.1.1.4)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Citric acid)

Citric acidCIT
DrugBank DB04272

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05544Pro_racemase

Proline racemase

ClanCL0288DAP_epimerase

External Links

ECOD PDB View: 4JBD RCSB PDB: 4JBD PDBe: 4JBD UniProt: A5VZY6

Downloads

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