ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4k90A1 - ECOD Domain | ECOD

ECOD/Domains/e4k90A1

e4k90A1

UID: 001120761

RepresentativePDB

Range: A:246-634
PDB: 4K90 chain A(all domains)
UniProt: P46075 (all domains)
Gene: mep

Molecule: Extracellular metalloproteinase mep

3D Structure

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Related Domains

Browse other domains in Peptidase_M36 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M36(2498.1.1.21)

Ligands

in contact, ≤ 4 Å

Boric acidBO3
drugDrugBank DB11326
Malonic acidMLA
drugDrugBank DB02175
Calcium ion

Pfam Families

PF02128Peptidase_M36

Fungalysin metallopeptidase (M36)

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 4K90 RCSB PDB: 4K90 PDBe: 4K90 UniProt: P46075

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Zinc ionZN

metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.