ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1gkkB1 - ECOD Domain | ECOD

ECOD/Domains/e1gkkB1

e1gkkB1

UID: 000112108

PDB

Range: B:803-1075
PDB: 1GKK chain B(all domains)
UniProt: P51584 (all domains)
Gene: xynY

Molecule: ENDO-1,4-BETA-XYLANASE Y

3D Structure

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Related Domains

Browse other domains in Esterase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta-Hydrolases(7579)

HH-groupalpha/beta-Hydrolases(7579.1)

TT-groupalpha/beta-Hydrolases(7579.1.1)

FFamilyEsterase(7579.1.1.9)

Ligands

in contact, ≤ 4 Å

Cadmium ionCD
metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00756Esterase

Putative esterase

ClanCL0028AB_hydrolase

External Links

ECOD PDB View: 1GKK RCSB PDB: 1GKK PDBe: 1GKK UniProt: P51584

Downloads

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