ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1z05A2 - ECOD Domain | ECOD

ECOD/Domains/e1z05A2

e1z05A2

UID: 000011225

RepresentativePDB

Range: A:209-405
PDB: 1Z05 chain A(all domains)
UniProt: Q9KQJ1 (all domains)
Gene: VC_2007

Molecule: transcriptional regulator, ROK family

3D Structure

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Related Domains

Browse other domains in ROK →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyROK(2484.1.1.8)

Ligands

in contact, ≤ 4 Å

MercaptoethanolBME
drugDrugBank DB03345
Zinc ionZN
metal

+ 2 additives (Glycerin, Sulfate ion)

Pfam Families

ROK family

ClanCL0108Actin_ATPase

External Links

ECOD PDB View: 1Z05 RCSB PDB: 1Z05 PDBe: 1Z05 UniProt: Q9KQJ1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.