ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4iisA1 - ECOD Domain | ECOD

ECOD/Domains/e4iisA1

e4iisA1

UID: 001122724

PDB

Range: A:1-316
PDB: 4IIS chain A(all domains)
UniProt: D1M8S7 (all domains)
Gene: P3X46_005876

Molecule: Beta-1,3-glucanase form 'RRII Gln 2'

3D Structure

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Related Domains

Browse other domains in Glyco_hydro_17 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyGlyco_hydro_17(2002.1.1.19)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Cacodylate ion, Citrate anion)

Cacodylate ionCAC
Citrate anionFLC

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00332Glyco_hydro_17

Glycosyl hydrolases family 17

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4IIS RCSB PDB: 4IIS PDBe: 4IIS UniProt: D1M8S7

Downloads

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