ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4iobA1 - ECOD Domain | ECOD

ECOD/Domains/e4iobA1

e4iobA1

UID: 001122743

PDB

Range: A:254-414
PDB: 4IOB chain A(all domains)
UniProt: Q9I4L5 (all domains)
Gene: tpbB

Molecule: Diguanylate cyclase TpbB

3D Structure

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Related Domains

Browse other domains in GGDEF →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyGGDEF(304.48.1.14)

Ligands

in contact, ≤ 4 Å

tert-butanolTBU
drugDrugBank DB03900

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer.

Pfam Families

Diguanylate cyclase, GGDEF domain

ClanCL0276Nucleot_cyclase

External Links

ECOD PDB View: 4IOB RCSB PDB: 4IOB PDBe: 4IOB UniProt: Q9I4L5

Downloads

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Drug annotations from DrugDomain.