ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ly6S1 - ECOD Domain | ECOD

ECOD/Domains/e4ly6S1

e4ly6S1

UID: 001123083

PDB

Range: S:308-384
PDB: 4LY6 chain S(all domains)
UniProt: O67198 (all domains)
Gene: ntrC1

Molecule: Transcriptional regulator (NtrC family)

3D Structure

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Related Domains

Browse other domains in AAA_lid_14 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHistone-like(148)

HH-groupHistone-related(148.1)

TT-groupAAA+ ATPase lid domain(148.1.3)

FFamilyAAA_lid_14(148.1.3.172)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833within 5 Å only
[[[(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-tris(fluoranyl)beryllium08T

Pfam Families

PF25601AAA_lid_14

AAA+ ATPase lid domain

ClanCL0671AAA_lid

External Links

ECOD PDB View: 4LY6 RCSB PDB: 4LY6 PDBe: 4LY6 UniProt: O67198

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Magnesium ionMG

metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.