ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4m9wB1 - ECOD Domain | ECOD

ECOD/Domains/e4m9wB1

e4m9wB1

UID: 001123239

PDB

Range: B:2-157
PDB: 4M9W chain B(all domains)
UniProt: Q6VT83 (all domains)

Molecule: Ara h 8 allergen

3D Structure

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Related Domains

Browse other domains in Bet_v_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTBP-like(331)

HH-groupBet v1-like(331.3)

TT-groupBet v1-like(331.3.1)

FFamilyBet_v_1(331.3.1.1)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 1 additive (2-(N-morpholino)ethanesulfonic acid)

2-(N-morpholino)ethanesulfonic acidMES
DrugBank DB03814

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00407Bet_v_1

Pathogenesis-related protein Bet v 1 family

ClanCL0209Bet_v_1_like

External Links

ECOD PDB View: 4M9W RCSB PDB: 4M9W PDBe: 4M9W UniProt: Q6VT83

Downloads

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