ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4hh4D1 - ECOD Domain | ECOD

ECOD/Domains/e4hh4D1

e4hh4D1

UID: 001123956

PDB

Range: D:4-254
PDB: 4HH4 chain D(all domains)
UniProt: E9JES0 (all domains)
Gene: HDA41_002763

Molecule: CcbJ

3D Structure

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Related Domains

Browse other domains in Methyltransf_25 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltransf_25(2003.1.5.81)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752

+ 3 additives (HEPES, Glycerin, Sulfate ion)

HEPESEPE
DrugBank DB16872

Pfam Families

PF13649Methyltransf_25

Methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4HH4 RCSB PDB: 4HH4 PDBe: 4HH4 UniProt: E9JES0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

GlycerinGOL

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.