ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4mdkB1 - ECOD Domain | ECOD

ECOD/Domains/e4mdkB1

e4mdkB1

UID: 001124762

PDB

Range: B:7-184
PDB: 4MDK chain B(all domains)
UniProt: P49427 (all domains)
Gene: CDC34

Molecule: Ubiquitin-conjugating enzyme E2 R1

3D Structure

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Related Domains

Browse other domains in UQ_con →

Classification

AArchitecturea+b two layers(a.11)

XX-groupUBC-like(216)

HH-groupUBC-like(216.1)

TT-groupUBC-like(216.1.1)

FFamilyUQ_con(216.1.1.1)

Ligands

in contact, ≤ 4 Å

4,5-dideoxy-5-(3',5'-dichlorobiphenyl-4-yl)-4-[(methoxyacetyl)amino]-L-arabinonic acidU94

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Ubiquitin-conjugating enzyme

ClanCL0208UBC

External Links

ECOD PDB View: 4MDK RCSB PDB: 4MDK PDBe: 4MDK UniProt: P49427

Downloads

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