ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4mknA1 - ECOD Domain | ECOD

ECOD/Domains/e4mknA1

e4mknA1

UID: 001125615

PDB

Range: A:2-256
PDB: 4MKN chain A(all domains)
UniProt: Q5S7Y5 (all domains)
Gene: TIM

Molecule: Triosephosphate isomerase

3D Structure

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Related Domains

Browse other domains in TIM →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyTIM(2002.1.1.3)

Ligands

in contact, ≤ 4 Å

(4R)-2-METHYLPENTANE-2,4-DIOLMRD

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Triosephosphate isomerase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4MKN RCSB PDB: 4MKN PDBe: 4MKN UniProt: Q5S7Y5

Downloads

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