ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4nq1A1 - ECOD Domain | ECOD

ECOD/Domains/e4nq1A1

e4nq1A1

UID: 001125635

PDB

Range: A:1-290
PDB: 4NQ1 chain A(all domains)
UniProt: D5T7I7 (all domains)

Molecule: 4-hydroxy-tetrahydrodipicolinate synthase

3D Structure

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Related Domains

Browse other domains in DHDPS →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDHDPS(2002.1.1.29)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Magnesium ionMG
metal
(4R)-2-METHYLPENTANE-2,4-DIOLMRD

Pfam Families

Dihydrodipicolinate synthetase family

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4NQ1 RCSB PDB: 4NQ1 PDBe: 4NQ1 UniProt: D5T7I7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.