ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4nvnB1 - ECOD Domain | ECOD

ECOD/Domains/e4nvnB1

e4nvnB1

UID: 001126515

PDB

Range: B:4-292
PDB: 4NVN chain B(all domains)
UniProt: B3LRE1 (all domains)
Gene: SCRG_04081

Molecule: Cytochrome c peroxidase

3D Structure

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Related Domains

Browse other domains in peroxidase →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupHeme-dependent peroxidases(136)

HH-groupHeme-dependent peroxidases(136.1)

TT-groupHeme-dependent peroxidases(136.1.1)

FFamilyperoxidase(136.1.1.1)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
2,3-dihydrobenzo[h][1,6]naphthyridin-4(1H)-one2O1

+ 1 additive (Phosphate ion)

Phosphate ion

Pfam Families

PF00141peroxidase

Peroxidase

ClanCL0617Peroxidase

External Links

ECOD PDB View: 4NVN RCSB PDB: 4NVN PDBe: 4NVN UniProt: B3LRE1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.