ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1zmaA1 - ECOD Domain | ECOD

ECOD/Domains/e1zmaA1

e1zmaA1

UID: 000011276

RepresentativePDB

Range: A:1-115
PDB: 1ZMA chain A(all domains)
UniProt: Q8DP51 (all domains)
Gene: bta

Molecule: bacterocin transport accessory protein

3D Structure

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Related Domains

Browse other domains in DUF6568 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupThioredoxin-like(2485)

HH-groupThioredoxin-like(2485.1)

TT-groupThioredoxin-like(2485.1.1)

FFamilyDUF6568(2485.1.1.80)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Formic acid)

Formic acidFMT
DrugBank DB01942within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF20207PedC-like

Pediocin PA-1 biosynthesis protein PedC-like

ClanCL0172Thioredoxin

External Links

ECOD PDB View: 1ZMA RCSB PDB: 1ZMA PDBe: 1ZMA UniProt: Q8DP51

Downloads

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