ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1tvgA1 - ECOD Domain | ECOD

ECOD/Domains/e1tvgA1

e1tvgA1

UID: 000001130

RepresentativePDB

Range: A:4-140
PDB: 1TVG chain A(all domains)
UniProt: Q9Y547 (all domains)
Gene: IFT25

Molecule: LOC51668 protein

3D Structure

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Related Domains

Browse other domains in F5_F8_type_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyF5_F8_type_C(10.32.1.2)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
SAMARIUM (III) IONSM
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00754F5_F8_type_C

F5/8 type C domain

ClanCL0202GBD

External Links

ECOD PDB View: 1TVG RCSB PDB: 1TVG PDBe: 1TVG UniProt: Q9Y547

Downloads

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