ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1kqgB3 - ECOD Domain | ECOD

ECOD/Domains/e1kqgB3

e1kqgB3

UID: 001130004

PDB

Range: B:100-159
PDB: 1KQG chain B(all domains)
UniProt: P0AAJ3 (all domains)
Gene: fdnH

Molecule: FORMATE DEHYDROGENASE, NITRATE-INDUCIBLE, IRON-SULFUR SUBUNIT

3D Structure

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Related Domains

Browse other domains in Fer4_6, Fer4_11 →

Classification

AArchitecturea+b two layers(a.11)

XX-group4Fe-4S ferredoxin(205)

HH-group4Fe-4S ferredoxin(205.1)

TT-group4Fe-4S ferredoxin(205.1.1)

FFamilyFer4_6, Fer4_11(205.1.1.48)

Ligands

in contact, ≤ 4 Å

Protoporphyrin ix containing feHEM
Iron/sulfur clusterSF4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

4Fe-4S binding domain

ClanCL03444Fe-4S

PF13247Fer4_11

4Fe-4S dicluster domain

ClanCL03444Fe-4S

External Links

ECOD PDB View: 1KQG RCSB PDB: 1KQG PDBe: 1KQG UniProt: P0AAJ3

Downloads

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